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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20781467_20782666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20781467 - 20782666

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

VNSNLQRTILGGIAFVAIKG

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

77.7

31.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.6

0.91

0.7

89.1

25.9

Minor 5ss

42.6

-0.8

3.1

56.7

42.1

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

MARCHF5

Ensembl Gene ID:

ENSAPLG00000005697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025835

20781350 - 20806829

25480

ENSAPLT00000005889

20781201 - 20807631

26431