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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20786823_20791572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20786823 - 20791572

Intron Length:

4750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

ACATCTTGAAAT

Flanking Amino Acid:

AEYLIVFPKLGPVVYVLDLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

74.9

0.62

81.3

29.9

Major PPT

72.3

0.5

0.8

67.6

32.5

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

56.9

0.3

1.5

69.56

Associated Gene:

Gene:

MARCHF5

Ensembl Gene ID:

ENSAPLG00000005697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025835

20781350 - 20806829

25480

ENSAPLT00000005889

20781201 - 20807631

26431