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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20816062_20837493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20816062 - 20837493

Intron Length:

21432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTCCTT

Flanking Amino Acid:

DNGNNLLPFQDRNRPYDTFN

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

89.3

0.88

0.6

88.9

20.3

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

46.1

-0.2

3.6

82.98

39.3

Associated Gene:

Gene:

CPEB3

Ensembl Gene ID:

ENSAPLG00000014437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042381

20811993 - 20895664

83672

ENSAPLT00000017266

20814037 - 20895664

81628

ENSAPLT00000015035

20814037 - 20895664

81628