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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20837654_20850001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20837654 - 20850001

Intron Length:

12348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAGCTTTTATTT

Flanking Amino Acid:

ADIMWRNHFTGRMGINFHHP

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.1

79.8

34.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.1

0.63

0.9

Minor 5ss

30.3

-2.3

45.7

Minor BPS

51.1

0.11

1.5

65.6

39.7

Associated Gene:

Gene:

CPEB3

Ensembl Gene ID:

ENSAPLG00000014437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042381

20811993 - 20895664

83672

ENSAPLT00000017266

20814037 - 20895664

81628