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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20868952_20887760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20868952 - 20887760

Intron Length:

18809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAGC

5'SS Class:

strong_major

3'SS Sequence:

TATCCTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GCACCCTTATCC

Flanking Amino Acid:

AESKSYFPPKGYAFLLFQEE

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

73.5

0.53

71.6

38.1

Minor 5ss

36.1

-1.6

2.7

46.4

41.8

Minor BPS

56.9

0.2

1.7

61.76

Associated Gene:

Gene:

CPEB3

Ensembl Gene ID:

ENSAPLG00000014437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042381

20811993 - 20895664

83672

ENSAPLT00000017266

20814037 - 20895664

81628

ENSAPLT00000015035

20814037 - 20895664

81628