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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20926369_20927602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20926369 - 20927602

Intron Length:

1234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCATGCTTAACT

Flanking Amino Acid:

PAGQRHSIVSRFNNDPSIDV

Intron Amino Acid Position:

1721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.1

43.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.8

81.5

34.2

Minor 5ss

43.5

-0.7

2.9

58.6

45.6

Minor BPS

65.1

0.55

1.8

76.34

46.1

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006373

20925290 - 20975196

49907

ENSAPLT00000041326

20925290 - 20969442

44153