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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20929057_20929470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20929057 - 20929470

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTGTGGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GCATACTTATTT

Flanking Amino Acid:

DYYCILSPLQVQLYEDFAKS

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

72.7

0.51

64.5

45.9

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

51.7

0.13

1.8

66.58

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907