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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20929903_20930482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20929903 - 20930482

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AATAATTTAACA

Flanking Amino Acid:

RIILSGTPIQNNVLELWSLF

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.5

0.73

0.9

81.1

35.5

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

61.9

0.37

1.5

69.12

36.4

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907