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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20930774_20930956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20930774 - 20930956

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

TCAGTTATGACT

Flanking Amino Acid:

HYTGPPTERARLQHQVKRHN

Intron Amino Acid Position:

1397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

74.7

0.62

1.1

65.7

Major PPT

70.2

0.46

1.1

74.9

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

47.5

-0.1

1.7

63.48

41.4

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907