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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20932285_20934484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20932285 - 20934484

Intron Length:

2200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

AAAACTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GCTGCTTTAAAA

Flanking Amino Acid:

ATLIRLMPLEAGIPDPPNMS

Intron Amino Acid Position:

1250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

61.2

0.25

56.5

43.2

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

0.31

1.5

64.9

41.7

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907