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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20934634_20935162_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

20934634 - 20935162

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

ATAGCTGATCCAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TATTCCTTAATA

Flanking Amino Acid:

KQEGAIEALACVMEQLDVGI

Intron Amino Acid Position:

1200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

55.3

44.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

61.5

0.26

1.1

51.5

46.5

Minor 5ss

90.2

1.35

1.1

85.6

31.5

Minor BPS

88.2

1.2

0.8

88.81

27.4

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907