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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20936034_20937284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20936034 - 20937284

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGTCC

5'SS Class:

major

3'SS Sequence:

TGTTTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTACTGAATT

Flanking Amino Acid:

SGSIPTELDEAQKPYVVQRR

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.9

34.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

76.1

0.59

0.9

67.8

42.5

Minor 5ss

31.9

-2.1

3.3

41.8

45.1

Minor BPS

67.8

0.64

1.6

84.76

35.2

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907