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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20937476_20938434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20937476 - 20938434

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TTGTTGTCAGCT

Flanking Amino Acid:

QPQSSHENSKGPNSDKDGMH

Intron Amino Acid Position:

981

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

0.5

1.1

76.9

32.8

Major PPT

0.7

0.8

76.7

31.9

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

46.2

-0.2

2.4

71.52

45.5

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907