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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20941114_20941606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20941114 - 20941606

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTCTGTTACA

Flanking Amino Acid:

VICEWAALQKECRAVAICVQ

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

88.8

0.87

0.8

83.7

31.3

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

57.4

0.23

2.3

78.96

37.6

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907