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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20941782_20941950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20941782 - 20941950

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCAGTTTA

5'SS Class:

major

3'SS Sequence:

CTCCTTTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TAACATTGAAGC

Flanking Amino Acid:

VVMRARMMAAKLLGALCCCI

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.3

77.8

33.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

78.8

0.65

0.9

79.5

32.5

Minor 5ss

40.9

-1

2.8

50.4

40.2

Minor BPS

44.2

-0.4

1.8

52.14

38.2

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907