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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20942884_20943173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20942884 - 20943173

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGTA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATGATCT

Flanking Amino Acid:

NQEILDLIHKVWLELLNKAS

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.1

36.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

47.9

-0.2

2.9

66.7

44.7

Minor BPS

53.7

0.2

78.35

43.4

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907