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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20943279_20943352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20943279 - 20943352

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATCTTCTTGATC

Flanking Amino Acid:

LFTLLSTQDQSSSTWLTPIL

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

83.8

0.84

73.6

41.8

Major PPT

80.3

0.68

0.9

77.2

36.4

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

68.4

0.56

1.1

70.88

34.8

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907