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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20945897_20946142_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20945897 - 20946142

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTATTTTATCC

Flanking Amino Acid:

DRFGDFVSDEVVAPVRETCA

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.5

0.62

0.8

70.9

39.4

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

62.7

0.38

1.6

74.3

36.6

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907