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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20946239_20947753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20946239 - 20947753

Intron Length:

1515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACGAAA

U12 Branch Point Sequence:

CCTCTTTTTACA

Flanking Amino Acid:

GKMGDSSLEEMIQQHQEWLE

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

52.6

0.06

1.3

61.9

33.9

Major PPT

87.8

0.85

0.7

82.5

26.1

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

50.5

0.01

1.6

59.46

40.6

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006373

20925290 - 20975196

49907

ENSAPLT00000041326

20925290 - 20969442

44153