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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20947844_20950409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20947844 - 20950409

Intron Length:

2566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTCACTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTATTTCACT

Flanking Amino Acid:

CNDLFNPSWEVRHGAGTGLR

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.3

0.68

0.8

73.1

37.2

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

66.1

0.59

1.9

88.66

36.3

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907