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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20952554_20952852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20952554 - 20952852

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

ACTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

GTTGTAAGAATT

Flanking Amino Acid:

SSVSLVNKQPTLQAAELIDS

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.2

67.5

39.4

Major BPS

0.2

1.3

67.7

36.5

Major PPT

84.3

0.77

0.8

81.3

Minor 5ss

36.6

-1.5

3.1

51.2

45.5

Minor BPS

43.3

-0.4

1.9

63.48

40.6

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907