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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20955365_20957479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20955365 - 20957479

Intron Length:

2115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTCTT

5'SS Class:

major

3'SS Sequence:

AATGTTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CATTCCTTAATA

Flanking Amino Acid:

EWNPTPRSKQDPGSESPMED

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

70.9

40.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.7

0.42

66.6

44.2

Minor 5ss

33.7

-1.9

3.3

50.2

Minor BPS

81.3

0.98

1.1

80.47

35.5

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907