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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20957595_20958608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20957595 - 20958608

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTTCTTTAAAG

Flanking Amino Acid:

PHELNNLLSKVLVYLRSTNW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.7

0.69

27.2

Minor 5ss

45.7

-0.5

2.8

61.4

37.1

Minor BPS

71.4

0.53

1.5

72.3

40.7

Associated Gene:

Gene:

BTAF1

Ensembl Gene ID:

ENSAPLG00000006110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041326

20925290 - 20969442

44153

ENSAPLT00000006373

20925290 - 20975196

49907