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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21027159_21029560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21027159 - 21029560

Intron Length:

2402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCATCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTCTGTTCATCT

Flanking Amino Acid:

VVALSCLLLASKFEEKEDSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

69.1

0.43

1.1

36.4

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

47.6

-0.1

2.2

71.47

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006701

21023535 - 21031472

7938