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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21092489_21093802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21092489 - 21093802

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTCCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCCATTACA

Flanking Amino Acid:

LPRNRLHLKTDHEANNNNDN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

87.2

0.84

0.7

81.4

29.1

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

68.5

0.58

1.9

84.96

34.1

Associated Gene:

Gene:

BLNK

Ensembl Gene ID:

ENSAPLG00000006563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019502

21081553 - 21176268

94716

ENSAPLT00000006837

21081553 - 21127325

45773

ENSAPLT00000039162

21081553 - 21176268

94716