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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21109456_21146807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21109456 - 21146807

Intron Length:

37352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TAATATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TGTTGTTTAATA

Flanking Amino Acid:

ELSRFKIMHQPKLQKMVHDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

73.5

38.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

0.61

0.9

70.3

40.4

Minor 5ss

46.6

-0.3

2.8

66.2

38.1

Minor BPS

66.3

0.51

1.7

75.58

36.3

Associated Gene:

Gene:

BLNK

Ensembl Gene ID:

ENSAPLG00000006563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039162

21081553 - 21176268

94716

ENSAPLT00000019502

21081553 - 21176268

94716