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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21229622_21230871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21229622 - 21230871

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTACCTTTGATT

Flanking Amino Acid:

TLKLSKMQRAGFLYYEDLVS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.5

0.73

0.9

73.4

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

69.8

0.71

1.1

81.1

34.4

Associated Gene:

Gene:

DNTT

Ensembl Gene ID:

ENSAPLG00000012429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018872

21203863 - 21290242

86380

ENSAPLT00000048374

21203863 - 21310629

106767

ENSAPLT00000012950

21155091 - 21293298

138208

ENSAPLT00000040439

21182020 - 21290242

108223

ENSAPLT00000039510

21203863 - 21293298

89436

ENSAPLT00000022244

21199991 - 21293298

93308