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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21271117_21310539_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21271117 - 21310539

Intron Length:

39423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

CTCAAAAAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTACTCTCAAAA

Flanking Amino Acid:

DNHALYDKRKVIHMRKIPKQ

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.07

1.1

49.5

41.7

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

55.4

0.17

1.6

67.5

38.1

Associated Gene:

Gene:

DNTT

Ensembl Gene ID:

ENSAPLG00000012429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048374

21203863 - 21310629

106767