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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21529517_21529736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21529517 - 21529736

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCCCCCTGACG

Flanking Amino Acid:

DAQDSRPRDLGPGGSERSSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.1

0.47

0.8

64.8

30.8

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

47.9

-0.3

1.8

49.82

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046895

21529291 - 21532122

2832

ENSAPLT00000039352

21529291 - 21532201

2911

ENSAPLT00000027588

21529291 - 21530437

1147