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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2162117_2238637_R

Intron Information:

Intron Rank:

146107

Intron Class:

major

Intron Phase:

Intron Coordinates:

2162117 - 2238637

Intron Length:

76521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTACCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

GGTACCTTAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

80.3

0.68

0.9

71.1

39.9

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

63.5

0.42

1.7

70.06

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047453

2162056 - 2239662

77607