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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21628239_21647501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21628239 - 21647501

Intron Length:

19263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GCCTCTTTAAAG

Flanking Amino Acid:

AVRATENKVLRVPMEKPRQR

Intron Amino Acid Position:

1281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.7

35.4

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

70.3

0.46

70.2

34.2

Minor 5ss

47.1

-0.3

2.6

65.5

45.8

Minor BPS

59.4

0.16

1.5

56.87

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048411

21627187 - 21937128

309942