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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21651066_21670390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21651066 - 21670390

Intron Length:

19325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCATCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCTTTCCCATCT

Flanking Amino Acid:

PRYFSRHRSAGISKLFGKEY

Intron Amino Acid Position:

1192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

75.4

0.57

0.8

70.2

29.5

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

47.7

-0.1

2.1

72.42

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048411

21627187 - 21937128

309942

ENSAPLT00000031541

21628146 - 21937128

308983