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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21660_22626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21660 - 22626

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

AATTCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

ATATCCACAAAT

Flanking Amino Acid:

PFLHNLQPFTWHEKIKKKDP

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

60.3

0.26

65.5

Major PPT

78.4

0.64

0.8

70.5

40.3

Minor 5ss

39.7

-1.2

3.2

53.4

44.8

Minor BPS

52.1

0.14

1.9

74.76

40.9

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790