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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21671227_21674478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21671227 - 21674478

Intron Length:

3252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

TGTTCCTGACTC

Flanking Amino Acid:

NNYGIEGNAPYCWMAWEPSL

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

75.5

0.63

1.1

34.4

Major PPT

84.8

0.78

0.9

76.9

42.1

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

60.3

0.3

1.8

72.1

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031541

21628146 - 21937128

308983

ENSAPLT00000020421

21670005 - 21766745

96741

ENSAPLT00000048411

21627187 - 21937128

309942

ENSAPLT00000043481

21670005 - 21937128

267124