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Intron Name: Anas_platyrhynchos_platyrhynchos_6_217228_239778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

217228 - 239778

Intron Length:

22551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

ATAATTTCTATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATCTTCATAATT

Flanking Amino Acid:

ILQLQGDIVNICLGNEAHSL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

72.9

39.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

72.3

0.5

0.9

66.3

39.9

Minor 5ss

-0.4

2.8

63.9

41.4

Minor BPS

64.1

0.52

1.6

78.67

37.9

Associated Gene:

Gene:

RNLS

Ensembl Gene ID:

ENSAPLG00000015666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017605

215255 - 239960

24706