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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21826550_21836586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21826550 - 21836586

Intron Length:

10037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CTTGTTGTAACT

Flanking Amino Acid:

MFVGLNSLHKLNLSGNIFSS

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

77.9

31.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

36.4

-1.5

2.9

48.3

41.8

Minor BPS

51.6

0.13

2.1

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043481

21670005 - 21937128

267124

ENSAPLT00000031541

21628146 - 21937128

308983

ENSAPLT00000012536

21670005 - 21937128

267124

ENSAPLT00000048411

21627187 - 21937128

309942