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Intron Name: Anas_platyrhynchos_platyrhynchos_6_21836659_21840486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21836659 - 21840486

Intron Length:

3828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

AFNGLSELKRLDLSNNRIGC

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012536

21670005 - 21937128

267124

ENSAPLT00000048411

21627187 - 21937128

309942

ENSAPLT00000043481

21670005 - 21937128

267124

ENSAPLT00000031541

21628146 - 21937128

308983