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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22016113_22020534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22016113 - 22020534

Intron Length:

4422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

TGTATCACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTATGTATCACT

Flanking Amino Acid:

KQTCTLQLESWGYNINDVMF

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

70.3

35.4

Major BPS

0.3

62.3

30.4

Major PPT

74.3

0.55

0.9

66.6

39.3

Minor 5ss

35.7

-1.6

50.4

45.6

Minor BPS

46.4

-0.2

2.4

73.34

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012499

21999000 - 22032400

33401