Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22067688_22068461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22067688 - 22068461

Intron Length:

774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCACA

5'SS Class:

major

3'SS Sequence:

CTTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

GAAAGATCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

67.6

39.4

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

86.3

0.82

0.7

24.1

Minor 5ss

32.8

-2

3.1

40.2

45.7

Minor BPS

36.4

-0.9

2.1

49.57

42.8

Associated Gene:

Gene:

ENTPD1

Ensembl Gene ID:

ENSAPLG00000011301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043751

22067541 - 22095230

27690