About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22093095_22093814_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
22093095 - 22093814
Intron Length:
720

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTACTGCAG
5'SS Class:
major
3'SS Sequence:
TCCATTCATCCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CATTCAT
U12 Branch Point Sequence:
CTTTCTTCCATT
Flanking Amino Acid:
LGATAGMRLLSLENKNAADK
Intron Amino Acid Position:
140

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.3
0.41
1.1
53.5
45
Major BPS
79.8
0.74
0.9
81.3
29.9
Major PPT
74
0.54
0.9
65.7
40
Minor 5ss
29.1
-2.4
3.4
38.3
46.7
Minor BPS
52.9
0.17
2
75.4
42.3

Associated Gene:

Gene:
ENTPD1
Ensembl Gene ID:
ENSAPLG00000011301
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011809
22068097 - 22097018
28922
ENSAPLT00000043751
22067541 - 22095230
27690
ENSAPLT00000040577
22050217 - 22095230
45014