Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22094798_22096192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22094798 - 22096192

Intron Length:

1395

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCAGGTTAAAAT

Flanking Amino Acid:

LQQKLARDIQAFSAFYFVMN

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.7

1.15

0.7

87.7

23.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

22.6

-3.2

3.8

32.5

42.3

Minor BPS

42.3

-0.5

2.1

56.97

45.9

Associated Gene:

Gene:

ENTPD1

Ensembl Gene ID:

ENSAPLG00000011301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011809

22068097 - 22097018

28922