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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22104957_22107399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22104957 - 22107399

Intron Length:

2443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

TTGCTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCACAGCTGATG

Flanking Amino Acid:

FSDYPGIHEPLEPEFKYVGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

62.7

43.4

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

82.6

0.73

0.8

77.4

31.3

Minor 5ss

32.5

-2

2.6

39.5

38.8

Minor BPS

35.7

-1.2

2.2

38.26

38.5

Associated Gene:

Gene:

CPN1

Ensembl Gene ID:

ENSAPLG00000011182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011638

22104734 - 22114924

10191