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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22108295_22109157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22108295 - 22109157

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTGGTCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TCCTGTGTGACT

Flanking Amino Acid:

PTPDDKLFQKLAKTYSYAHG

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

76.2

0.59

69.4

41.7

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

45.4

-0.2

2.4

65.84

45.8

Associated Gene:

Gene:

CPN1

Ensembl Gene ID:

ENSAPLG00000011182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011638

22104734 - 22114924

10191