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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22109702_22110015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22109702 - 22110015

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

AGGGCCTTAACC

Flanking Amino Acid:

REALVAFIEEIHQGIKGMVS

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

80.4

0.68

0.8

31.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

69.1

0.58

1.4

69.55

41.8

Associated Gene:

Gene:

CPN1

Ensembl Gene ID:

ENSAPLG00000011182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011638

22104734 - 22114924

10191