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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22110116_22112008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22110116 - 22112008

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTCGC

5'SS Class:

major

3'SS Sequence:

CCTTGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTCTTCTCACCT

Flanking Amino Acid:

VQGISHDVTSGDMGDYFRLL

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

54.4

44.7

Major BPS

0.87

0.8

85.6

Major PPT

77.5

0.62

0.9

68.3

42.2

Minor 5ss

28.2

-2.5

3.1

35.4

41.3

Minor BPS

52.2

0.15

1.9

71.07

46.1

Associated Gene:

Gene:

CPN1

Ensembl Gene ID:

ENSAPLG00000011182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011638

22104734 - 22114924

10191