Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22148209_22148810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22148209 - 22148810

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTCTTTCCATT

Flanking Amino Acid:

RIMVPLQQAQVQNVDFEGLF

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.9

0.61

0.8

36.7

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

45.7

-0.2

1.9

64.38

41.1

Associated Gene:

Gene:

DNMBP

Ensembl Gene ID:

ENSAPLG00000010732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028831

22128451 - 22154149

25699

ENSAPLT00000018118

22128451 - 22154149

25699

ENSAPLT00000042050

22125086 - 22154149

29064

ENSAPLT00000011194

22139178 - 22154149

14972

ENSAPLT00000037495

22131140 - 22154149

23010

ENSAPLT00000033714

22124436 - 22154149

29714