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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22150134_22150746_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22150134 - 22150746

Intron Length:
613

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGTGCC

5'SS Class:
strong_major

3'SS Sequence:
CCCAACTTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTGCAT

U12 Branch Point Sequence:
TTTGTCCCAACT

Flanking Amino Acid:
LDSLRSLYSEWGCTNYINLG

Intron Amino Acid Position:
501

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.2
0.88
0.9
76
34.9

Major BPS
57.3
0.18
1.6
71.4
45.1

Major PPT
66.7
0.38
0.9
56.6
38.3

Minor 5ss
34.1
-1.8
3.1
41.9
38.9

Minor BPS
54.5
0.22
2
80.59
41.2

Associated Gene:

Gene:
DNMBP

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22139178 - 22154149
14972

22125086 - 22154149
29064

22131140 - 22154149
23010

22124436 - 22154149
29714

22128451 - 22154149
25699