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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22150947_22151273_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22150947 - 22151273

Intron Length:
327

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTAGC

5'SS Class:
strong_major

3'SS Sequence:
TCAATCTCTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TCTGCTTCAATC

Flanking Amino Acid:
INEYKRRKDLVLKYRKGDED

Intron Amino Acid Position:
568

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.9
0.75
1
72.2
39.5

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
71.1
0.48
0.9
62.6
39.4

Minor 5ss
30.2
-2.3
2.6
28.5
36

Minor BPS
57.2
0.21
1.6
65.76
40.9

Associated Gene:

Gene:
DNMBP

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22128451 - 22154149
25699

22128451 - 22154149
25699

22125086 - 22154149
29064

22139178 - 22154149
14972

22131140 - 22154149
23010

22124436 - 22154149
29714