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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22165038_22165297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22165038 - 22165297

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

GCTTCCTCAGCC

Flanking Amino Acid:

TSAIHHDPISGSAVRFSDAT

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

73.1

0.52

1.1

69.1

41.8

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

57.3

0.21

1.8

67.68

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009170

22155474 - 22172796

17323