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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22168478_22168817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22168478 - 22168817

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

ACCCAATTACTT

Flanking Amino Acid:

KAQSQDILVMEEKQPKKKKK

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

75.5

0.57

0.8

67.2

34.7

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

42.1

-0.5

1.9

53.67

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009170

22155474 - 22172796

17323